Research Interests

Forever Young: Murphy's worm studies may lead to new treatments to stop aging.

The goal of our work is to understand the molecular mechanisms governing aging and longevity, including diseases that accompany old age.

As humans age, we experience many forms of physiological decline.   We used to think that aging was an unavoidable result of living, simply a matter of cells wearing out over time.   However, genetic studies in several model organisms have demonstrated convincingly that this is not the case.   In worms, flies, yeast, and mice, single gene mutations have resulted in dramatic increases in lifespan.   What this suggests is not only that aging is a regulated process, but also that it can be disrupted.   Mutations in regulatory genes, such as the insulin receptor, increase longevity.   Thus, some downstream genes must normally cause the animal to age, while other genes seem to be capable of preventing aging.

Currently, longevity studies in model organisms commonly focus on the ultimate endpoint, death.   To change this paradigm, my lab focuses on genetic pathways and specific biological functions that become impaired with age.

a young C. elegans worm
young C. elegans worm
an old C. elegans worm
old C. elegans worm

To find genes that contribute to maintaining the biological processes that exhibit age-related decline, we use the small model organism, the nematode C. elegans.  This worm shares several aging traits with humans: it slows down with age, its skin becomes wrinkled, and its ability to sense its environment declines.   These worms have an experimentally feasible lifespan (2-3 weeks) and their signs of aging are visible at both the gross and microscopic level, so we can measure the changes that take place over time rapidly.

a day 4 adult C. elegans
day 4 C. elegans adult

Because C. elegans shares many aging traits with humans, we can use it to probe the vital biological processes that otherwise degrade with age.

a day 16 C. elegans with lipofuscin accumulation
day 16 adult with lipofuscin accumulation

For example, various activities are easily measured in C. elegans, and we can assess these behaviors with age.   By designing quantitative methods to assess function and then performing tests to look for improvement, we can find the genes required for maintenance of these functions.

We also use expression microarrays to analyze changes in transcription that occur with age and in mutant backgrounds that delay aging.   This work has already identified novel pro- and anti-aging genes, and will further elucidate the molecular mechanisms underlying age-related disease.   The development of therapeutics to affect these aging-related genes will drastically improve quality of life in the elderly and help in the treatment of age-related diseases.   By using a model system with a short lifespan, measurable behaviors, and simple genetics, we should be able to identify quickly genes that are critical for the maintenance of health.

Projects

My lab is focused on several main questions:

  1. How do the downstream targets of the insulin-like pathway / FOXO transcription factor cellularly affect aging?
    We have already identified several excellent candidate genes whose cellular and biochemical roles are waiting to be discovered.

  2. What are the common downstream targets of the major longevity pathways?
    While there are several genetically distinct longevity pathways, some important downstream genes may be shared, both in C. elegans and in higher organisms.

  3. What other factors play a role in such age-related processes as neuronal decline, tissue deterioration, and the cessation of reproduction?
    We will exploit the genetic tools of C. elegans to discover important genes in the maintenance of these vital processes.

Tools

How can we find the downstream factors that actually carry out the cellular processes of aging or preventing aging?  We have several tools at our disposal.

  • Genetic screens can uncover important regulatory pathways, and C. elegans is an excellent model system for genetic analyses.

  • Genomic techniques, such as DNA microarray expression analysis, make it possible to discover entire gene networks that lie downstream of master regulators.

  • The ability to quickly knock down gene expression through double-stranded RNA interference allows us to quickly test our candidate genes to verify their roles in longevity.

  • Bioinformatic approaches to discover common regulatory pathways and promoter regulatory elements complement all of our experimental studies.

  • Additionally, we are developing robotic methods to make all of our assays high-throughput.

These and other technology development projects will be an important factor driving the progress of our research.   By combining the strengths of traditional C. elegans genetics with newly developed genomics approaches we hope to unveil some of the fundamental mysteries of the process of aging.

Funding